7afc10fd6f2d1caf3663a8b7c08b7d5d8920e25a,java/src/org/broadinstitute/sting/playground/utils/GenotypingCallStats.java,GenotypingCallStats,toString,#,34

Before Change


				covered, assessed, Utils.percentage(assessed, covered), 
				ref, Utils.percentage(ref,assessed),
				variant, Utils.percentage(variant,assessed),
				non_biallelic_variant, Utils.percentage(non_biallelic_variant, variant))
			);
		
		return b.toString();

After Change


				ref, Utils.percentage(ref,assessed))
			);

		int z = consistent_ref+inconsistent_ref;
		b.append( String.format("            ref assessed for consistency: %d (%3.2f%% ref)%n", 
				z, Utils.percentage(z, ref) )
			);
		b.append( String.format("               consistent ref: %d (%3.2f%% consistency-assessed ref)%n", 
				consistent_ref, Utils.percentage(consistent_ref,z) )
			);

		b.append( String.format("         variants: %d (%3.2f%% assessed)%n", 
				variant, Utils.percentage(variant,assessed))
			);
		b.append( String.format("            multiallelic: %d (%3.2f%% variants)%n", 
				non_biallelic_variant, Utils.percentage(non_biallelic_variant, variant))
			);
		
		z = consistent_variant+inconsistent_variant;
		b.append( String.format("            variants assessed for consistency: %d (%3.2f%% variants)%n",