44ac49aa346d6757b41fe99d40930dd271df7fcd,public/java/src/org/broadinstitute/sting/gatk/walkers/annotator/HaplotypeScore.java,HaplotypeScore,annotate,#RefMetaDataTracker#AnnotatorCompatibleWalker#ReferenceContext#Map#VariantContext#,63
In pattern: SUPERPATTERN
Frequency: 9
Non-data size: 9
Instances
1333081022
ebanks@broadinstitute.org
broadgsa/gatk,44ac49aa346d6757b41fe99d40930dd271df7fcd,public/java/src/org/broadinstitute/sting/gatk/walkers/annotator/HaplotypeScore.java,HaplotypeScore,annotate,#RefMetaDataTracker#AnnotatorCompatibleWalker#ReferenceContext#Map#VariantContext#,63
1333112726
ebanks@broadinstitute.org
broadgsa/gatk,b467cd1daebe5fcb82f43476e393caaf4a1b840d,public/java/src/org/broadinstitute/sting/gatk/walkers/annotator/RMSMappingQuality.java,RMSMappingQuality,annotate,#RefMetaDataTracker#AnnotatorCompatibleWalker#ReferenceContext#Map#VariantContext#,29
1333112726
ebanks@broadinstitute.org
broadgsa/gatk,b467cd1daebe5fcb82f43476e393caaf4a1b840d,public/java/src/org/broadinstitute/sting/gatk/walkers/annotator/FisherStrand.java,FisherStrand,getIndelContingencyTable,#Map#,237
1333112726
ebanks@broadinstitute.org
broadgsa/gatk,b467cd1daebe5fcb82f43476e393caaf4a1b840d,public/java/src/org/broadinstitute/sting/gatk/walkers/annotator/SpanningDeletions.java,SpanningDeletions,annotate,#RefMetaDataTracker#AnnotatorCompatibleWalker#ReferenceContext#Map#VariantContext#,25
1333112726
ebanks@broadinstitute.org
broadgsa/gatk,b467cd1daebe5fcb82f43476e393caaf4a1b840d,public/java/src/org/broadinstitute/sting/gatk/walkers/annotator/TechnologyComposition.java,TechnologyComposition,annotate,#RefMetaDataTracker#AnnotatorCompatibleWalker#ReferenceContext#Map#VariantContext#,31
1333112726
ebanks@broadinstitute.org
broadgsa/gatk,b467cd1daebe5fcb82f43476e393caaf4a1b840d,public/java/src/org/broadinstitute/sting/gatk/walkers/annotator/MappingQualityZero.java,MappingQualityZero,annotate,#RefMetaDataTracker#AnnotatorCompatibleWalker#ReferenceContext#Map#VariantContext#,27
1333081022
ebanks@broadinstitute.org
broadgsa/gatk,44ac49aa346d6757b41fe99d40930dd271df7fcd,public/java/src/org/broadinstitute/sting/gatk/walkers/annotator/HaplotypeScore.java,HaplotypeScore,annotate,#RefMetaDataTracker#AnnotatorCompatibleWalker#ReferenceContext#Map#VariantContext#,63
1333112726
ebanks@broadinstitute.org
broadgsa/gatk,b467cd1daebe5fcb82f43476e393caaf4a1b840d,public/java/src/org/broadinstitute/sting/gatk/walkers/annotator/MappingQualityZeroFraction.java,MappingQualityZeroFraction,annotate,#RefMetaDataTracker#AnnotatorCompatibleWalker#ReferenceContext#Map#VariantContext#,25
1333112726
ebanks@broadinstitute.org
broadgsa/gatk,b467cd1daebe5fcb82f43476e393caaf4a1b840d,public/java/src/org/broadinstitute/sting/gatk/walkers/annotator/MappingQualityZeroBySample.java,MappingQualityZeroBySample,annotate,#RefMetaDataTracker#AnnotatorCompatibleWalker#ReferenceContext#AlignmentContext#VariantContext#Genotype#,51